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A framework for the evaluation of biosecurity, commercial, regulatory and scientific impacts of plant viruses and viroids identified by NGS technologies (CROSBI ID 235728)

Prilog u časopisu | pregledni rad (znanstveni) | međunarodna recenzija

Massart, Sébastien ; Candresse, Thierry ; Gil, José ; Lacomme, Christoph ; Predajna, Lukas ; Ravnikar, Maja ; Reynard, Jean-Sébastien ; Rumbou, Artemis ; Saldarelli, Pasqualle ; Škorić, Dijana et al. A framework for the evaluation of biosecurity, commercial, regulatory and scientific impacts of plant viruses and viroids identified by NGS technologies // Frontiers in microbiology, 8 (2017), 45-1-45-7. doi: 10.3389/fmicb.2017.00045

Podaci o odgovornosti

Massart, Sébastien ; Candresse, Thierry ; Gil, José ; Lacomme, Christoph ; Predajna, Lukas ; Ravnikar, Maja ; Reynard, Jean-Sébastien ; Rumbou, Artemis ; Saldarelli, Pasqualle ; Škorić, Dijana ; Vainio, Eeva J. ; Valkonen, Jari P.T. ; Vanderschuren, Hervé ; Varveri, Christina ; Wetzel, Thierry

engleski

A framework for the evaluation of biosecurity, commercial, regulatory and scientific impacts of plant viruses and viroids identified by NGS technologies

Recent advances in high-throughput sequencing technologies and bioinformatics have generated huge new opportunities for discovering and diagnosing plant viruses and viroids. Plant virology has undoubtedly benefited from these new methodologies, but at the same time, faces now substantial bottlenecks, namely the biological characterization of the newly discovered viruses and the analysis of their impact at the biosecurity, commercial, regulatory, and scientific levels. This paper proposes a scaled and progressive scientific framework for efficient biological characterization and risk assessment when a previously known or a new plant virus is detected by next generation sequencing (NGS) technologies. Four case studies are also presented to illustrate the need for such a framework, and to discuss the scenarios.

NGS, pest risk analysis, virus diseases, biological characterization, plant health, regulatory agencies

Rad je rezultat i zajednička publikacija istraživača uključenih u projekt COST Action FA1407 "Application of next generation sequencing for the study and diagnosis of plant viral diseases in agriculture“ (http://www.cost.eu/COST_Actions/fa/FA1407).

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Podaci o izdanju

8

2017.

45-1-45-7

objavljeno

1664-302X

10.3389/fmicb.2017.00045

Povezanost rada

Poljoprivreda (agronomija), Šumarstvo, Biologija

Poveznice
Indeksiranost